NameChávez de Diego, Sebastián
DepartmentGenética
Knowledge areaGenética
Professional categoryCatedrático de Universidad
E-mailRequest
           
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PhD Thesis
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Molecular bases of proliferative heterogeneity in Saccharomyces cerevisiae

Delgado Román, Irene; Chávez de Diego, Sebastián; Muñoz Centeno, María de la Cruz (2023)
Proliferative heterogeneity has been widely described in clonal cultures, but the mechanisms underlying this phenomenon ...
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Enhanced Gene Regulation by Cooperation between mRNA Decay and Gene Transcription

García Martínez, José; Singh, Abhyudai; Medina, Daniel; Chávez de Diego, Sebastián; Pérez Ortín, José E. (Elsevier, 2023)
It has become increasingly clear in the last few years that gene expression in eukaryotes is not a linear process from ...
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Nucleo-cytoplasmic Shuttling of RNA-binding Factors: mRNA Buffering and Beyond

Pérez Ortín, J. E.; Chávez de Diego, Sebastián (Elsevier, 2022)
Gene expression is a highly regulated process that adapts RNAs and proteins content to the cellular context. Under ...
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The Total mRNA Concentration Buffering System in Yeast is Global Rather than Gene-specific

García Martínez, José; Medina, Daniel A.; Bellvís, P.; Sun, M.; Cramer, P.; Chávez de Diego, Sebastián; Pérez Ortín, José E. (Cold Spring Harbor Laboratory Press, 2021)
Gene expression in eukaryotes does not follow a linear process from transcription to translation and mRNA degradation. ...
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Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration

Begley, Victoria Sarah; Jordán Pla, Antonio; Peñate Salas, Xenia; Garrido Godino, Ana Isabel; Challal, Drice; Cuevas Bermúdez, Abel; Mitjavila, Adrià; Barucco, Mara; Gutiérrez Pozo, Gabriel; Singh, Abhyudai; Alepuz, Paula M.; Chávez de Diego, Sebastián (Taylor & Francis, 2021)
mRNA homoeostasis is favoured by crosstalk between transcription and degradation machineries. Both the Ccr4-Not and the ...
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Cell Volume Homeostatically Controls the rDNA Repeat Copy Number and rRNA Synthesis Rate in Yeast

Pérez Ortín, José E.; Mena, A.; Barba Aliaga, M.; Singh, Abhyudai; Chávez de Diego, Sebastián; García Martínez, J. (Public Library of Science, 2021)
The adjustment of transcription and translation rates to the changing needs of cells is of utmost importance for their ...
Article
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Human prefoldin modulates co-transcriptional pre-mRNA splicing

Payán Bravo, Laura; Fontalva Ostio, Sara; Peñate Salas, Xenia; Cases, Ildefonso; Guerrero Martínez, José A.; Pareja Sánchez, Yerma; Odriozola Gil, Yosu; Lara, Esther; Jimeno González, Silvia; Suñé Negre, Carlos María; Muñoz Centeno, María de la Cruz; Reyes, José C.; Chávez de Diego, Sebastián (Oxford University Press, 2021)
Prefoldin is a heterohexameric complex conserved from archaea to humans that plays a cochaperone role during the ...
Article
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Overexpression of canonical prefoldin associates with the risk of mortality and metastasis in non-small cell lung cancer

Peñate Salas, Xenia; Praena Fernández, Juan Manuel; Romero Pareja, Pedro; Enguix Riego, María del Valle; Payán Bravo, Laura; Vieites Pérez-Quintela, Begoña; Chávez de Diego, Sebastián; López Guerra, José Luis (2020)
Canonical prefoldin is a protein cochaperone composed of six di erent subunits (PFDN1 to 6). PFDN1 overexpression promotes ...
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The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4

Begley, Victoria Sarah; Corzo García, Daniel; Jordán Pla, Antonio; Cuevas Bermúdez, Abel; Miguel Jiménez, María Dolores De; Pérez Aguado, David; Machuca Ostos, Mercedes; Navarro Gómez, Francisco; Chávez de Diego, María José; Pérez Ortín, José Enrique; Chávez de Diego, Sebastián (Oxford University Press, 2019)
Co-transcriptional imprinting of mRNA by Rpb4 and Rpb7 subunits of RNA polymerase II (RNAPII) and by the Ccr4–Not complex ...
PhD Thesis
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Contribución de prefoldina a la expresión génica en células humanas

Payán Bravo, Laura; Chávez de Diego, Sebastián; Peñate Salas, Xenia (2019)
La prefoldina es una cochaperona que está presente en todos los organismos eucarióticos. Es conocida principalmente por ...
Article
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High levels of histones promote whole-genome-duplications and trigger a Swe1WEE1-dependent phosphorylation of Cdc28CDK1

Maya Miles, Douglas; Peñate Salas, Xenia; Sanmartín Olmo, Trinidad; Jourquin, Frederic; Muñoz Centeno, María de la Cruz; Mendoza, Manuel; Simon, Marie-Noelle; Chávez de Diego, Sebastián; Geli, Vincent (eLife Sciences, 2018)
Whole-genome duplications (WGDs) have played a central role in the evolution of genomes and constitute an important source ...
PhD Thesis
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The role of RNA Polymerase II-dependent transcription elongation in the cross-talk between mRNA synthesis and decay.

Begley, Victoria Sarah; Chávez de Diego, Sebastián (2018)
The main molecule in gene expression is messenger RNA (mRNA) which transfers the information contained in genes in the ...
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Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning

Gutiérrez Pozo, Gabriel; Millán Zambrano, Gonzalo; Medina, Daniel A.; Jordán Pla, Antonio; Pérez Ortín, José E.; Peñate Salas, Xenia; Chávez de Diego, Sebastián (BioMed Central, 2017)
TFIIS stimulates RNA cleavage by RNA polymerase II and promotes the resolution of backtracking events. TFIIS acts in the ...
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Asymmetric cell division requires specific mechanisms for adjusting global transcription

Mena, Adriana; Medina, Daniel A.; García Martínez, José Luis; Begley, Victoria Sarah; Singh, Abhyudai; Chávez de Diego, Sebastián; Muñoz Centeno, María de la Cruz; Pérez Ortín, José Enrique (Oxford University Press, 2017)
Most cells divide symmetrically into two approximately identical cells. There are many examples, however, of asymmetric ...
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The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation

Gómez Herreros, Fernando; Margaritis, Thanasis; Rodríguez Galán, Olga; Pelechano, Vicent; Begley, Victoria Sarah; Millán Zambrano, Gonzalo; Morillo Huesca, Macarena; Muñoz Centeno, María de la Cruz; Pérez Ortín, José Enrique; Cruz Díaz, Jesús de la; Holstege, Frank C.P.; Chávez de Diego, Sebastián (Oxford University Press, 2017)
Ribosome assembly requires the concerted expression of hundreds of genes, which are transcribed by all three nuclear RNA ...
Article
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Regulation of transcription elongation in response to osmostress

Silva, Andrea; Cavero, Santiago; Begley, Victoria Sarah; Solé, Carme; Böttcher, René; Chávez de Diego, Sebastián; Posas, Francesc; Nadal, Eulàlia de (Public Library of Science, 2017)
Cells trigger massive changes in gene expression upon environmental fluctuations. The Hog1 stress-activated protein kinase ...
PhD Thesis
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Microbial analysis by microencapsulation and its application to study proliferation heterogeneity

Delgado Ramos, Lidia; Múñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (2016)
El interés hacia la producción de microcápsulas ha aumentado en los últimos años significativamente debido a la gran ...
PhD Thesis
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Genetic and genomic analysis of RNA polymerase II backtracking in saccharomyces cerevisiae

Miguel Jiménez, María Dolores De; Muñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (2016)
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Growth rate controls mRNA turnover in steady and non-steady states

García Martínez, José; Troulé, K.; Chávez de Diego, Sebastián; Pérez Ortín, José E. (Taylor & Francis, 2016)
Gene expression has been investigated in relation with growth rate in the yeast Saccharomyces cerevisiae, following different ...
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The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons

García Martínez, José; Delgado Ramos, Lidia; Ayala, Guillermo; Pelechano, Vicent; Andrés León, Eduardo; Chávez de Diego, Sebastián; Pérez Ortín, José E. (Oxford University Press, 2016)
We analyzed 80 different genomic experiments, and found a positive correlation between both RNA polymerase II transcription ...
Article
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H3K4 monomethylation dictates nucleosome dynamics and chromatin remodeling at stress-responsive genes

Nadal Jiménez, Mariona; Mas, Glòria; Millán Zambrano, Gonzalo; Solé, Carme; Chávez de Diego, Sebastián; Nadal, Eulàlia de (Oxford University Press, 2015)
Chromatin remodeling is essential for proper adaptation to extracellular stimuli. The p38-related Hog1 SAPK is an important ...
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Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle

Jordán Pla, Antonio; Gupta, Ishaan; Miguel Jiménez, María Dolores De; Steinmetz, Lars M.; Chávez de Diego, Sebastián; Pelechano, Vicent; Pérez Ortín, José E. (Oxford University Press, 2015)
The particular behaviour of eukaryotic RNA polymerases along different gene regions and amongst distinct gene functional ...
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Flow Cytometry of Microencapsulated Colonies for Genetics Analysis of Filamentous Fungi

Delgado Ramos, Lidia; Marcos Rodríguez, Ana Teresa; Ramos Guelfo, María Salud; Sánchez Barrionuevo, Leyre; Chávez de Diego, Sebastián; Cánovas López, David (Genetics Society of America:, 2014)
The analysis of filamentous fungi by flow cytometry has been impossible to date due to their filamentous nature and size. ...
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Cytoplasmic 5′-3′ exonuclease Xrn1p is also a genome-wide transcription factor in yeast

Medina, Daniel A.; Jordán Pla, Antonio; Millán Zambrano, Gonzalo; Chávez de Diego, Sebastián; Pérez Ortín, José E. (Frontiers Media, 2014)
The 5′ to 3′ exoribonuclease Xrn1 is a large protein involved in cytoplasmatic mRNA degradation as a critical component ...
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Nuclear functions of prefoldin

Millán Zambrano, Gonzalo; Chávez de Diego, Sebastián (The Royal Society, 2014)
Prefoldin is a cochaperone, present in all eukaryotes, that cooperates with the chaperonin CCT. It is known mainly for its ...
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The yeast prefoldin-like URI-orthologue Bud27 associates with the RSC nucleosome remodeler and modulates transcription

Mirón García, María Carmen; Garrido Godino, Ana Isabel; Martínez Fernández, Verónica; Fernández Pevida, Antonio; Cuevas Bermúdez, Abel; Martín Expósito, Manuel; Chávez de Diego, Sebastián; Cruz Díaz, Jesús de la; Navarro, Francisco (Oxford University Press, 2014)
Bud27, the yeast orthologue of human URI/RMP, is a member of the prefoldin-like family of ATPindependent molecular chaperones. ...
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Balanced production of ribosome components is required for proper G/S transition in saccharomyces cerevisiae

Gómez Herreros, Fernando; Rodríguez Galán, Olga; Morillo Huesca, Macarena; Maya, Douglas; Arista Romero, María; Cruz Díaz, Jesús de la; Chávez de Diego, Sebastián; Muñoz Centeno, María de la Cruz (American Society for Biochemistry and Molecular Biology Inc., 2013)
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A Genome-Wide Screen Identifies Yeast Genes Required for Tolerance to Technical Toxaphene, an Organochlorinated Pesticide Mixture

Gaytán, B. D.; Lerot, J. M.; Chávez de Diego, Sebastián; Peñate Salas, Xenia; Loguinov, A.; Denslow, N.; Vulpe, C. (2013)
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The Prefoldin Complex Regulates Chromatin Dynamics during Transcription Elongation

Millán Zambrano, Gonzalo; Rodríguez Gil, Alfonso; Peñate Salas, Xenia; Miguel Jiménez, María Dolores De; Morillo Huesca, Macarena; Krogan, Nevan; Chávez de Diego, Sebastián (Public Library of Science, 2013)
Transcriptional elongation requires the concerted action of several factors that allow RNA polymerase II to advance through ...
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Genome-wide studies of mRNA synthesis and degradation in eukaryotes

Pérez-Ortín, José E.; Miguel Jiménez, María Dolores De; Chávez de Diego, Sebastián (Elsevier BV, 2012)
In recent years, the use of genome-wide technologies has revolutionized the study of eukaryotic transcription producing ...
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Gene Control during Transcription Elongation

Chávez de Diego, Sebastián; Hermand, Damien; Gross, David S.; Suñé Negre, Carlos María (2012)
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TFIIS is required for the balanced expression of the genes encoding ribosomal components under transcriptional stress

Gómez Herreros, Fernando; Miguel Jiménez, María Dolores de; Morillo Huesca, Macarena; Delgado Ramos, Lidia; Muñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (Oxford University Press, 2012)
Transcription factor IIS (TFIIS) stimulates RNA cleavage by RNA polymerase II by allowing backtracked enzymes to resume ...
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One step back before moving forward: regulation of transcription elongation by arrest and backtracking

Gómez Herreros, Fernando; Miguel Jiménez, María Dolores De; Millán Zambrano, Gonzalo; Peñate Salas, Xenia; Delgado Ramos, Lidia; Muñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (Wiley-Blackwell, 2012)
RNA polymerase II backtracking is a well-known phenomenon, but its involvement in gene regulation is yet to be addressed. ...
PhD Thesis
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Una conexión entre el complejo FACT y progresión de la célula Saccharomyces cerevisiae

Maya Miles, Douglas; Muñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (2012)
The FACT complex is an essential component of eukaryotic ce ... lls able to modify the chromatin structure allowing ...
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Chromatin reassembly factors are involved in transcriptional interference promoting HIV latency

Gallastegui, Edurne; Millán Zambrano, Gonzalo; Terme, Jean Michel; Chávez de Diego, Sebastián; Jordan, Albert (American Society for Microbiology, 2011)
The establishment of a stable reservoir of latently infected cells allows HIV to persist in the host. Usually, HIV infection ...
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Application of flow focusing to the break-up of a magnetite suspension jet for the production of paramagnetic microparticles

Martín Banderas, Lucía; González Prieto, Román; Rodríguez Gil, Alfonso; Fernández Arévalo, María Mercedes; Flores Mosquera, María; Chávez de Diego, Sebastián; Gañán-Calvo, Alfonso M. (2011)
Paramagnetic particles offer an extensive improvement in the magnetic separation or purification of a wide variety of ...
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The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors

Rodríguez Gil, Alfonso; Chávez de Diego, Sebastián; García Martínez, José; Géli, Vincent; Muñoz Centeno, María de la Cruz; Pelechano, Vicent; Pérez Ortín, José E. (2010)
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FACT Prevents the Accumulation of Free Histones Evicted from Transcribed Chromatin and a Subsequent Cell Cycle Delay in G1

Morillo Huesca, Macarena; Maya, Douglas; Muñoz Centeno, María de la Cruz; Singh, Rakesh Kumar; Oreal, Vicent; Reddy, Gajjalaiahvari Ugander; Chávez de Diego, Sebastián (Public Library of Science, 2010)
The FACT complex participates in chromatin assembly and disassembly during transcription elongation. The yeast mutants ...
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A complete set of nascent transcription rates for yeast genes

Chávez de Diego, Sebastián; Pérez Ortín, José E.; Pelechano, Vicent (2010)
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Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair

Gaillard, Hélène; Tous Rivera, Cristina; Botet, Javier; González Aguilera, Cristina; Quintero, María José; Viladevall, Laia; García Rubio, María Luisa; Rodríguez Gil, Alfonso; Marín, Antonio; Ariño, Joaquín; Revuelta, José Luis; Chávez de Diego, Sebastián; Aguilera López, Andrés (Public Library of Science, 2009)
RNA polymerases frequently deal with a number of obstacles during transcription elongation that need to be removed for ...
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Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes

Mas, Glòria; Nadal, Eulàlia de; Reinhard Dechant; Rodríguez de la Concepción, María Luisa; Logie, Colin; Jimeno González, Silvia; Chávez de Diego, Sebastián (EMBO Press, 2009)
For efficient transcription, RNA PolII must overcome the presence of nucleosomes. The p38-related MAPK Hog1 is an important ...
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Regulon-Specific Control of Transcription Elongation across the Yeast Genome

Pelechano, Vicent; Jimeno González, Silvia; Rodríguez Gil, Alfonso; García Martínez, José; Pérez Ortín, José E.; Chávez de Diego, Sebastián (Public Library of Science, 2009)
Transcription elongation by RNA polymerase II was often considered an invariant non-regulated process. However, genome-wide ...
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Yeast Genetic Analysis Reveals the Involvement of Chromatin Reassembly Factors in Repressing HIV-1 Basal Transcription

Vanti, Manuela; Gallastegui, Edurne; Respaldiza, Iñaki; Rodríguez Gil, Alfonso; Gómez Herreros, Fernando; Jimeno González, Silvia; Chávez de Diego, Sebastián (Public Library of Science, 2009)
Rebound of HIV viremia after interruption of anti-retroviral therapy is due to the small population of CD4+ T cells that ...
Patent. Invention
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Metodo para el ensayo de la expresion del genoma de una muestra biologica y kit para su realizacion.

Chávez de Diego, Sebastián; Rodriguez Gil, Alfonso (Oficina Española de Patentes y Marcas , 2008)
Método para el ensayo de la expresión del genoma de una muestra biológica y kit para su realización.El objeto de la presente ...
Patent. Invention
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Procedimiento de expresion regulada de genes en celulas eucarioticas y elementos para su realizacion

Quintero Carrasco, Maria Jose; Arevalo Rodriguez, Miguel; Cebolla Ramirez, Angel; Chávez de Diego, Sebastián (Oficina Española de Patentes y Marcas , 2008)
Procedimiento de expresión regulada de genes en células eucarióticas y elementos para su realización. La presente invención ...
Patent. Invention
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Procedimiento de preparación de partículas de tamaño micro y nanométrico con productos lábiles y partículas obtenidas

Gañán Calvo, Alfonso M.; Chávez de Diego, Sebastián; Cebolla Ramírez, Ángel; Flores Mosquera, María; Castro Hernández, Elena De (Universidad de Sevilla, 2008)
Procedimiento de preparación de partículas de tamaño micro y nanométrico con productos lábiles y partículas obtenidas. La ...
PhD Thesis
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Genómica funcional de la elongación transcripcional

Rodríguez Gil, Alfonso; Chávez de Diego, Sebastián (2008)
Los principales objetivos de esta Tesis Doctoral son: Desarrollo de un nuevo método para el estudio de la distribución ...
Patent. Invention
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Soporte sólido para la unión y/o síntesis química en fase sólida y procedimiento de utilización

Flores Mosquera, María; Rodríguez Gil, Alfonso; Gañán Calvo, Alfonso; Chávez de Diego, Sebastián; Cebolla Ramírez, Ángel (Oficina Española de Patentes y Marcas (OEPM), 2007)
Soporte sólido para la unión y/o síntesis química en fase sólida y procedimiento de utilización. En la presente invención ...
Patent. Invention
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Procedimiento y dispositivo para la obtención de partículas de tamaño micro y nanométrico

Gañán Calvo, Alfonso M.; Martín Banderas, Lucía; Flores Mosquera, María; Rodríguez Gil, Alfonso; Chávez de Diego, Sebastián; Cebolla Ramírez, Ángel (Oficina Española de Patentes y Marcas (OEPM), 2007)
Procedimiento y dispositivo para la obtención de partículas de tamaño micro y nanométrico. La presente invención está ...
PhD Thesis
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Elongación transcripcional en Saccharomyces Cerevisiae influencia en el control del ciclo celular y nuevas herramientas para su estudio "in vivo"

Morillo Huesca, Macarena; Muñoz Centeno, María de la Cruz; Chávez de Diego, Sebastián (2007)
La transcripción es el proceso mediante el cual la información genética, contenida en el DNA, es expresada en forma de ...
Article
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An improved system for estradiol-dependent regulation of gene expression in yeast

Chávez de Diego, Sebastián; Cebolla Ramírez, Ángel; Arévalo Rodríguez, Miguel; Quintero Carrasco, María José; Maya Miles, Douglas (2007)
PhD Thesis
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Protein interactions within the Set1 complex and their roles in the regulation of histone 3 lysine 4 methylation

Dehé, Pierre Marie; Dichtl, Bernhard; Schaft, Daniel; Roguev, Assen; Pamblanco, Mercè; Lebrun, Régine; Rodríguez Gil, Alfonso; Mkandawire, Msau; Landsberg, Katarina; Shevchenko, Anna; Chávez de Diego, Sebastián; Géli, Vincent (Elsevier, 2006)
Set1 is the catalytic subunit and the central component of the evolutionarily conserved Set1 complex (Set1C) that methylates ...
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A gene-specific requirement for FACT during transcription is related to the chromatin organization of the transcribed region

Jimeno González, Silvia; Gómez Herreros, Fernando; Alepuz, Paula M.; Chávez de Diego, Sebastián (2006)
The FACT complex stimulates transcription elongation on nucleosomal templates. In vivo experiments also involve FACT in ...
Patent. Invention
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Matrices de conductos capilares de utilidad quimica y biologica

Cebolla Ramirez, Angel; Gañán-Calvo, Alfonso M.; Chávez de Diego, Sebastián (Oficina Española de Patentes y Marcas , 2003)
Matrices de conductos capilares de utilidad química y biológica.El objeto de esta invención es un procedimiento para la ...
Article
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Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae

Chávez de Diego, Sebastián; García Rubio, María Luisa; Prado Velasco, José Félix; Aguilera López, Andrés (American Society for Microbiology, 2001)
Hpr1 forms, together with Tho2, Mft1, and Thp2, the THO complex, which controls transcription elongation and genome stability ...
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The presence of glutamate dehydrogenase is a selective advantage for the cyanobacterium Synechocystis sp. strain PCC 6803 under nonexponential growth conditions

Chávez de Diego, Sebastián; Lucena Soto, José Manuel; Reyes Rosa, José Carlos; Florencio Bellido, Francisco Javier; Candau Chacón, Pedro (American Society for Microbiology, 1999)
he unicellular cyanobacterium Synechocystis sp. strain PCC 6803 has two putative pathways for ammonium assimilation: the ...
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The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability

Chávez de Diego, Sebastián; Aguilera López, Andrés (Cold Spring Harbor Laboratory Press, 1997)
The yeast HPR1 gene plays an important role in genome stability, as indicated by the observation that hpr1 mutants have ...
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Nucleosome-mediated synergism between transcription factors on the mouse mammary tumor virus promoter

Chávez de Diego, Sebastián; Beato, Miguel (National Academy of Sciences, 1997)
In unstimulated mammalian cells and in Saccharomyces cerevisiae, the mouse mammary tumor virus (MMTV) promoter is silent ...
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Effect of Glucose Utilization on Nitrite Excretion by the Unicellular Cyanobacterium Synechocystis sp. Strain PCC 6803

Reyes, José C.; Chávez de Diego, Sebastián; Muro Pastor, María Isabel; Florencio Bellido, Francisco Javier (American Society for Microbiology, 1993)
Up to 1 mM nitrite was excreted by Synechocystis strain 6803 cells growing under mixotrophic or photoheterotrophic conditions. ...
PhD Thesis
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Glutamato deshidrogenasas en cianobacterias

Chávez de Diego, Sebastián; Candau Chacón, Pedro (1992)
La finalidad del trabajo que aquí se presenta es contribuir al conocimiento de la función desarrollada por la actividad ...