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Transcriptomic studies of the effect of nod gene-inducing molecules in rhizobia: Different weapons, one purpose

 

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dc.creator Jiménez Guerrero, Irene es
dc.creator Acosta Jurado, Sebastián es
dc.creator Cerro Sánchez, Pablo del es
dc.creator Navarro Gómez, Pilar es
dc.creator López Baena, Francisco Javier es
dc.creator Ollero Márquez, Francisco Javier es
dc.creator Vinardell González, José María es
dc.creator Pérez Montaño, Francisco de Asís es
dc.date.accessioned 2018-01-11T17:14:24Z
dc.date.available 2018-01-11T17:14:24Z
dc.date.issued 2018
dc.identifier.citation Jiménez Guerrero, I., Acosta Jurado, S., Cerro Sánchez, P.d., Navarro Gómez, P., López Baena, F.J., Ollero Márquez, F.J.,...,Pérez Montaño, F.d.A. (2018). Transcriptomic studies of the effect of nod gene-inducing molecules in rhizobia: Different weapons, one purpose. Genes, 9 (1), 1-.
dc.identifier.issn 2073-4425 es
dc.identifier.uri http://hdl.handle.net/11441/68812
dc.description.abstract Simultaneous quantification of transcripts of the whole bacterial genome allows the analysis of the global transcriptional response under changing conditions. RNA-seq and microarrays are the most used techniques to measure these transcriptomic changes, and both complement each other in transcriptome profiling. In this review, we exhaustively compiled the symbiosis-related transcriptomic reports (microarrays and RNA sequencing) carried out hitherto in rhizobia. This review is specially focused on transcriptomic changes that takes place when five rhizobial species, Bradyrhizobium japonicum (=diazoefficiens) USDA 110, Rhizobium leguminosarum biovar viciae 3841, Rhizobium tropici CIAT 899, Sinorhizobium (=Ensifer) meliloti 1021 and S. fredii HH103, recognize inducing flavonoids, plant-exuded phenolic compounds that activate the biosynthesis and export of Nod factors (NF) in all analysed rhizobia. Interestingly, our global transcriptomic comparison also indicates that each rhizobial species possesses its own arsenal of molecular weapons accompanying the set of NF in order to establish a successful interaction with host legumes. es
dc.description.sponsorship Ministerio de Economía y Competitividad BIO2016-78409-R, AGL2016-77163-R es
dc.format application/pdf es
dc.language.iso eng es
dc.publisher Multidisciplinary Digital Publishing Institute (MDPI) es
dc.relation.ispartof Genes, 9 (1), 1-.
dc.rights Attribution-NonCommercial-NoDerivatives 4.0 Internacional *
dc.rights.uri http://creativecommons.org/licenses/by-nc-nd/4.0/ *
dc.subject Flavonoids es
dc.subject Microarray es
dc.subject Nodulation es
dc.subject Rhizobia es
dc.subject RNA-seq es
dc.subject Symbiosis es
dc.subject Transcriptome es
dc.title Transcriptomic studies of the effect of nod gene-inducing molecules in rhizobia: Different weapons, one purpose es
dc.type info:eu-repo/semantics/article es
dc.type.version info:eu-repo/semantics/publishedVersion es
dc.rights.accessrights info:eu-repo/semantics/openAccess es
dc.contributor.affiliation Universidad de Sevilla. Departamento de Microbiología es
dc.relation.projectID BIO2016-78409-R es
dc.relation.projectID AGL2016-77163-R es
dc.relation.publisherversion http://dx.doi.org/10.3390/genes9010001 es
dc.identifier.doi 10.3390/genes9010001 es
idus.format.extent 27 p. es
dc.journaltitle Genes es
dc.publication.volumen 9 es
dc.publication.issue 1 es
dc.publication.initialPage 1 es
dc.contributor.funder Ministerio de Economía y Competitividad (MINECO). España
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