Ponencia
Analysis of P systems simulation on CUDA
Autor/es | Guerrero, Ginés D.
Cecilia, José M. García Carrasco, José M. Martínez del Amor, Miguel Ángel Pérez Hurtado de Mendoza, Ignacio Pérez Jiménez, Mario de Jesús |
Departamento | Universidad de Sevilla. Departamento de Ciencias de la Computación e Inteligencia Artificial |
Fecha de publicación | 2009 |
Fecha de depósito | 2018-01-08 |
Publicado en |
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Resumen | GPUs (Graphics Processing Unit) have been con-
solidated as a massively data-parallel coprocessor to
develop many general purpose computations, and en-
able developers to utilize several levels of parallelism
to obtain ... GPUs (Graphics Processing Unit) have been con- solidated as a massively data-parallel coprocessor to develop many general purpose computations, and en- able developers to utilize several levels of parallelism to obtain better performance of their applications. The massively parallel nature of certain computa- tions leads to use GPUs as an underlying architec- ture, becoming a good alternative to other paral- lel approaches. P systems or membrane systems are theoretical devices inspired in the way that liv- ing cells work, providing computational models and a high level computational modeling framework for biological systems. They are massively parallel dis- tributed, and non-deterministic systems. In this pa- per, we evaluate the GPU as the underlying archi- tecture to simulate the class of recognizer P systems with active membranes. We analyze the performance of three simulators implemented on CPU, CPU-GPU and GPU respectively. We compare them using a pre- sented P system as a benchmark, showing that the GPU is better suited than the CPU to simulate those P systems due to its massively parallel nature. |
Agencias financiadoras | Ministerio de Educación y Ciencia (MEC). España Junta de Andalucía |
Identificador del proyecto | TIN2006-13425
P08–TIC04200 |
Cita | Guerrero, G.D., Cecilia, J.M., García Carrasco, J.M., Martínez del Amor, M.Á., Pérez Hurtado, I. y Pérez Jiménez, M.d.J. (2009). Analysis of P systems simulation on CUDA. En JP2009 : XX Jornadas de Paralelismo La Coruña: SARTECO: Sociedad de Arquitectura y Tecnología de Computadores. |
Ficheros | Tamaño | Formato | Ver | Descripción |
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Jornadas-paralelismo-2009.pdf | 157.5Kb | [PDF] | Ver/ | |