BWMC2005. Brainstorming Week On Membrane Computing (3rd. 2005. Sevilla)
Recent Submissions
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Presentation
On a Class of P Automata as a Machine Model for Languages over Infinite Alphabets
(Fénix Editora, 2005)We show how P automata having a finite description and working with a finite object-alphabet can be used to describe ...
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Recognizing Membrane Structures with Tree Automata
(Fénix Editora, 2005)In this work we propose a new model of tree automata based on multisets of states and symbols linked to the finite control. ...
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Further Results on P Systems with Promoters/Inhibitors
(Fénix Editora, 2005)The paper gives several results regarding P systems with non-cooperative rules and promoters/inhibitors at the level of ...
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Dynamical Probabilistic P Systems: Definitions and Applications
(Fénix Editora, 2005)We introduce dynamical probabilistic P systems, a variant where probabilities associated to the rules change during the ...
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One More Universality Result for P Systems with Objects on Membranes
(Fénix Editora, 2005)We continue here the attempt to bridge brane calculi with membrane com- puting, following the investigation started in. ...
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Further Twenty Six Open Problems in Membrane Computing
(Fénix Editora, 2005)This is a sort of personal list of problems and research topics, compiled with the occasion of the Third Brainstorming Week on Membrane Computing, Sevilla, 2005.
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Presentation
Christiansen Grammar for Some P Systems
(Fénix Editora, 2005)The main goal of this work is to formally describe P systems. This is a necessary step to subsequently apply Christiansen ...
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A Tool for Using the SBML Format to Represent P Systems which Model Biological Reaction Networks
(Fénix Editora, 2005)In this paper we present a software tool to represent P systems modelling signalling networks of biochemical reactions ...
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First Steps Towards a Geometry of Computation
(Fénix Editora, 2005)We introduce a geometrical setting which seems promising for the study of computation in multiset rewriting systems, but ...
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Simulating Avascular Tumors with Membrane Systems
(Fénix Editora, 2005)Tumor growth has received a considerable attention by the scientific community. In the earliest stages of development, ...
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A Simulator for Confluent P Systems
(Fénix Editora, 2005)Software simulators for P system are nowadays the main tool to carry out experiments in the field of Membrane Computing. ...
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Matrix Languages, Register Machines, Vector Addition Systems
(Fénix Editora, 2005)We give a direct and simple proof of the equality of Parikh images of lan- guages generated by matrix grammars with ...
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Editing Configurations of P Systems
(Fénix Editora, 2005)This paper proposes and preliminarily investigates the possibility of transforming a configuration (membrane structure and ...
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EP-colonies: Micro-Organisms in a Cell-like Environment
(Fénix Editora, 2005)The aim of this note is to introduce a model for describing populations of extremely simple organisms which live in and ...
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Event-Related Outputs of Computations in P Systems
(Fénix Editora, 2005)We briefly investigate the idea to consider as the result of a computation in a P system the number of steps elapsed ...
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Specifying Dynamic Software Architectures by Using Membrane Systems
(Fénix Editora, 2005)We present a formalism for the definition of dynamic software architectures in terms of membrane systems, distributed ...
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Presentation
Abstract Machines of Systems Biology (Extended Abstract)
(Fénix Editora, 2005)Living cells are extremely well-organized autonomous systems, consisting of discrete interacting components. Key to ...
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WebPS: A Web-based P System Simulator with Query Facilities
(Fénix Editora, 2005)In this paper we present an open-source web-enabled simulator for P sys- tems. We use CLIPS embedded in C, and make the simulator available as a web application, complemented by a query language to specify the results.
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Presentation
Metabolic Algorithm with Time-varying Reaction Maps
(Fénix Editora, 2005)A symbolic-based approach to modelling biochemical processes and cellular dynamics is likely to turn useful in computational ...
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On Modelling Ion Fluxes Across Biological Membranes with P Systems
(Fénix Editora, 2005)In this report we address the challenge of using P systems to integrate at the whole cell level both active and passive ...