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Analysing Gene Networks with PDP Systems. Arabidopsis thaliana, a Case Study
dc.creator | Valencia Cabrera, Luis | |
dc.creator | García Quismondo, Manuel | |
dc.creator | Pérez Jiménez, Mario de Jesús | |
dc.creator | Su, Yansen | |
dc.creator | Yu, Hui | |
dc.creator | Pan, Linqiang | |
dc.date.accessioned | 2016-02-02T10:54:10Z | |
dc.date.available | 2016-02-02T10:54:10Z | |
dc.date.issued | 2013 | |
dc.identifier.isbn | 978-84-940691-9-2 | es |
dc.identifier.uri | http://hdl.handle.net/11441/33820 | |
dc.description.abstract | Gene Regulatory Networks (GRNs) are a useful tool for biologists to understand the interactions among genes in living organisms. A special kind of GRNs known as Logic Networks (LNs) has been recently introduced. These networks consider that the state of one or more genes can in uence another one. In a previous work, we proposed a Membrane Computing model which simulates the dynamics of LNs by drawing on the improved LAPP algorithm. In this paper we provide a case study for our LN model on a network which regulates the circadian rhythms of long{term studied plant Arabidopsis thaliana. We outline the software tools employed and propose a methodology for analysing LNs on our Membrane Computing model. At the end of the paper, some conclusions and future work are included. | es |
dc.description.sponsorship | Ministerio de Ciencia e Innovación TIN2012-37434 | |
dc.description.sponsorship | Junta de Andalucía P08-TIC-04200 | |
dc.format | application/pdf | es |
dc.language.iso | eng | es |
dc.publisher | Fénix Editora | es |
dc.relation.ispartof | Proceedings of the Eleventh Brainstorming Week on Membrane Computing, 257-272. Sevilla, E.T.S. de Ingeniería Informática, 4-8 de Febrero, 2013, | es |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Bioinformatics | es |
dc.subject | Genetics | es |
dc.subject | Gene networks | es |
dc.subject | Membrane Computing | es |
dc.subject | MeCoSim | es |
dc.subject | Software engineering | es |
dc.subject | Modelling | es |
dc.subject | LAPP | es |
dc.subject | Logic networks | es |
dc.title | Analysing Gene Networks with PDP Systems. Arabidopsis thaliana, a Case Study | es |
dc.type | info:eu-repo/semantics/conferenceObject | es |
dcterms.identifier | https://ror.org/03yxnpp24 | |
dc.type.version | info:eu-repo/semantics/publishedVersion | es |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es |
dc.contributor.affiliation | Universidad de Sevilla. Departamento de Ciencias de la Computación e Inteligencia Artificial | es |
dc.relation.projectID | TIN2012-37434 | |
dc.relation.projectID | P08-TIC-04200 | |
dc.contributor.group | Universidad de Sevilla. TIC193: Computación Natural | |
dc.identifier.idus | https://idus.us.es/xmlui/handle/11441/33820 | |
dc.contributor.funder | Ministerio de Ciencia e Innovación (MICIN). España | |
dc.contributor.funder | Junta de Andalucía |
Ficheros | Tamaño | Formato | Ver | Descripción |
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257_valencia_cabrera.pdf | 578.2Kb | [PDF] | Ver/ | |