dc.creator | Cho, Myong-Suk | es |
dc.creator | Kim, Jin Hyeong | es |
dc.creator | Kim, Chang-Seok | es |
dc.creator | Mejías Gimeno, José Antonio | es |
dc.creator | Kim, Seung-Chul | es |
dc.date.accessioned | 2023-12-12T15:15:11Z | |
dc.date.available | 2023-12-12T15:15:11Z | |
dc.date.issued | 2019 | |
dc.identifier.citation | Cho, M., Kim, J.H., Kim, C., Mejías Gimeno, J.A. y Kim, S. (2019). Sow Thistle Chloroplast Genomes: Insights into the Plastome Evolution and Relationship of Two Weedy Species, Sonchus asper and Sonchus oleraceus (Asteraceae). Genes, 10, 881. https://doi.org/10.3390/genes10110881. | |
dc.identifier.issn | 2073-4425 | es |
dc.identifier.uri | https://hdl.handle.net/11441/152434 | |
dc.description.abstract | Prickly sow thistle, Sonchus asper (L.) Hill, and common sow thistle, Sonchus oleraceus L., are
noxious weeds. Probably originating from the Mediterranean region, they have become widespread
species. They share similar morphology and are closely related. However, they differ in their
chromosome numbers and the precise relationship between them remains uncertain. Understanding
their chloroplast genome structure and evolution is an important initial step toward determining
their phylogenetic relationships and analyzing accelerating plant invasion processes on a global scale.
We assembled four accessions of chloroplast genomes (two S. asper and two S. oleraceus) by the next
generation sequencing approach and conducted comparative genomic analyses. All the chloroplast
genomes were highly conserved. Their sizes ranged from 151,808 to 151,849 bp, containing 130 genes
including 87 coding genes, 6 rRNA genes, and 37 tRNA genes. Phylogenetic analysis based on the
whole chloroplast genome sequences showed that S. asper shares a recent common ancestor with
S. oleraceus and suggested its likely involvement in a possible amphidiploid origin of S. oleraceus.
In total, 79 simple sequence repeats and highly variable regions were identified as the potential
chloroplast markers to determine genetic variation and colonization patterns of Sonchus species. | es |
dc.format | application/pdf | es |
dc.format.extent | 15 | es |
dc.language.iso | eng | es |
dc.publisher | MDPI | es |
dc.relation.ispartof | Genes, 10, 881. | |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Sonchus asper (L.) Hill | es |
dc.subject | Sonchus oleraceus L | es |
dc.subject | chloroplast genome evolution | es |
dc.subject | comparative genomic analyses | es |
dc.subject | hybridization | es |
dc.subject | invasive species | es |
dc.title | Sow Thistle Chloroplast Genomes: Insights into the Plastome Evolution and Relationship of Two Weedy Species, Sonchus asper and Sonchus oleraceus (Asteraceae) | es |
dc.type | info:eu-repo/semantics/article | es |
dcterms.identifier | https://ror.org/03yxnpp24 | |
dc.type.version | info:eu-repo/semantics/publishedVersion | es |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es |
dc.contributor.affiliation | Universidad de Sevilla. Departamento de Biología Vegetal y Ecología | es |
dc.identifier.doi | 10.3390/genes10110881 | es |
dc.journaltitle | Genes | es |
dc.publication.issue | 10 | es |
dc.publication.initialPage | 881 | es |