Artículo
MOMIC: A multi-omics pipeline for data analysis, integration and interpretation
Autor/es | Madrid Márquez, Laura
Rubio Escudero, Cristina Pontes Balanza, Beatriz González Pérez, Antonio Riquelme Santos, José Cristóbal Sáez, María E. |
Departamento | Universidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticos |
Fecha de publicación | 2022 |
Fecha de depósito | 2022-07-01 |
Publicado en |
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Resumen | Background and Objectives: The burst of high-throughput omics technologies has given
rise to a new era in systems biology, offering an unprecedented scenario for deriving meaningful
biological knowledge through the ... Background and Objectives: The burst of high-throughput omics technologies has given rise to a new era in systems biology, offering an unprecedented scenario for deriving meaningful biological knowledge through the integration of different layers of information. Methods: We have developed a new software tool, MOMIC, that guides the user through the application of different analysis on a wide range of omic data, from the independent single-omics analysis to the combination of heterogeneous data at different molecular levels. Results: The proposed pipeline is developed as a collection of Jupyter notebooks, easily editable, reproducible and well documented. It can be modified to accommodate new analysis workflows and data types. It is accessible via momic.us.es, and as a docker project available at github that can be locally installed. Conclusions: MOMIC offers a complete analysis environment for analysing and integrating multi-omics data in a single, easy-to-use platform. |
Agencias financiadoras | Ministerio de Economía y Competitividad (MINECO). España Junta de Andalucía Ministerio de Ciencia e Innovación (MICIN). España |
Identificador del proyecto | TIN2017-88209-C2-2-R
P18-RT-2778 US-1263341 IPT-2011-0952-900000 |
Cita | Madrid Márquez, L., Rubio Escudero, C., Pontes Balanza, B., González Pérez, A., Riquelme Santos, J.C. y Sáez, M.E. (2022). MOMIC: A multi-omics pipeline for data analysis, integration and interpretation. Applied Sciences, 12 (8 - art. nº3987) |
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applsci-12-03987-v2.pdf | 2.722Mb | [PDF] | Ver/ | |