dc.creator | Santiesteban Toca, Cosme E. | es |
dc.creator | Asencio Cortés, Gualberto | es |
dc.creator | Márquez Chamorro, Alfonso Eduardo | es |
dc.creator | Aguilar Ruiz, Jesús Salvador | es |
dc.date.accessioned | 2022-05-23T11:44:35Z | |
dc.date.available | 2022-05-23T11:44:35Z | |
dc.date.issued | 2012 | |
dc.identifier.citation | Santiesteban Toca, C.E., Asencio Cortés, G., Márquez Chamorro, A.E. y Aguilar Ruiz, J.S. (2012). Short-Range Interactions and Decision Tree-Based Protein Contact Map Predictor. En EvoBIO 2012: 10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (224-233), Málaga, España: Springer. | |
dc.identifier.isbn | 978-3-642-29065-7 | es |
dc.identifier.issn | 0302-9743 | es |
dc.identifier.uri | https://hdl.handle.net/11441/133535 | |
dc.description.abstract | In this paper, we focus on protein contact map prediction,
one of the most important intermediate steps of the protein folding prob lem. The objective of this research is to know how short-range interac tions can contribute to a system based on decision trees to learn about
the correlation among the covalent structures of a protein residues. We
propose a solution to predict protein contact maps that combines the
use of decision trees with a new input codification for short-range in teractions. The method’s performance was very satisfactory, improving
the accuracy instead using all information of the protein sequence. For a
globulin data set the method can predict contacts with a maximal accu racy of 43%. The presented predictive model illustrates that short-range
interactions play the predominant role in determining protein structure | es |
dc.format | application/pdf | es |
dc.format.extent | 10 | es |
dc.language.iso | eng | es |
dc.publisher | Springer | es |
dc.relation.ispartof | EvoBIO 2012: 10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (2012), pp. 224-233. | |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Protein structure prediction | es |
dc.subject | Protein contact map prediction | es |
dc.subject | Short-range interactions | es |
dc.subject | Decision trees | es |
dc.title | Short-Range Interactions and Decision Tree-Based Protein Contact Map Predictor | es |
dc.type | info:eu-repo/semantics/conferenceObject | es |
dcterms.identifier | https://ror.org/03yxnpp24 | |
dc.type.version | info:eu-repo/semantics/submittedVersion | es |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es |
dc.contributor.affiliation | Universidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticos | es |
dc.relation.publisherversion | https://link.springer.com/chapter/10.1007/978-3-642-29066-4_20 | es |
dc.identifier.doi | 10.1007/978-3-642-29066-4_20 | es |
dc.contributor.group | Universidad de Sevilla. TIC205: Ingeniería del Software Aplicada | es |
dc.publication.initialPage | 224 | es |
dc.publication.endPage | 233 | es |
dc.eventtitle | EvoBIO 2012: 10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics | es |
dc.eventinstitution | Málaga, España | es |
dc.relation.publicationplace | Berlin, Germany | es |
dc.identifier.sisius | 20131775 | es |