dc.creator | Márquez Chamorro, Alfonso Eduardo | es |
dc.creator | Asencio Cortés, Gualberto | es |
dc.creator | Divina, Federico | es |
dc.creator | Aguilar Ruiz, Jesús Salvador | es |
dc.date.accessioned | 2022-05-20T10:28:01Z | |
dc.date.available | 2022-05-20T10:28:01Z | |
dc.date.issued | 2012 | |
dc.identifier.citation | Márquez Chamorro, A.E., Asencio Cortés, G., Divina, F. y Aguilar Ruiz, J.S. (2012). Evolutionary decision rules for predicting protein contact maps. Pattern Analysis and Applications, 17 (4), 725-737. | |
dc.identifier.issn | 1433-7541 | es |
dc.identifier.uri | https://hdl.handle.net/11441/133505 | |
dc.description.abstract | Protein structure prediction is currently one of
the main open challenges in Bioinformatics. The protein
contact map is an useful, and commonly used, represen tation for protein 3D structure and represents binary
proximities (contact or non-contact) between each pair of
amino acids of a protein. In this work, we propose a multi objective evolutionary approach for contact map prediction
based on physico-chemical properties of amino acids. The
evolutionary algorithm produces a set of decision rules that
identifies contacts between amino acids. The rules obtained
by the algorithm impose a set of conditions based on amino
acid properties to predict contacts. We present results
obtained by our approach on four different protein data
sets. A statistical study was also performed to extract valid
conclusions from the set of prediction rules generated by
our algorithm. Results obtained confirm the validity of our
proposal. | es |
dc.format | application/pdf | es |
dc.format.extent | 13 | es |
dc.language.iso | eng | es |
dc.publisher | Springer | es |
dc.relation.ispartof | Pattern Analysis and Applications, 17 (4), 725-737. | |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Protein structure prediction | es |
dc.subject | Contact Map | es |
dc.subject | Multi-objective evolutionary computation | es |
dc.subject | Residue-residue contact | es |
dc.title | Evolutionary decision rules for predicting protein contact maps | es |
dc.type | info:eu-repo/semantics/article | es |
dcterms.identifier | https://ror.org/03yxnpp24 | |
dc.type.version | info:eu-repo/semantics/submittedVersion | es |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es |
dc.contributor.affiliation | Universidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticos | es |
dc.relation.publisherversion | https://link.springer.com/article/10.1007/s10044-012-0297-3 | es |
dc.identifier.doi | 10.1007/s10044-012-0297-3 | es |
dc.journaltitle | Pattern Analysis and Applications | es |
dc.publication.volumen | 17 | es |
dc.publication.issue | 4 | es |
dc.publication.initialPage | 725 | es |
dc.publication.endPage | 737 | es |
dc.identifier.sisius | 20389289 | es |