Ponencia
An efficient decision rule-based system for the protein residue-residue contact prediction
Autor/es | Márquez Chamorro, Alfonso Eduardo
Divina, Federico Bacardit, Jaume Aguilar Ruiz, Jesús Salvador |
Departamento | Universidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticos |
Fecha de publicación | 2013 |
Fecha de depósito | 2022-05-19 |
Publicado en |
|
ISBN/ISSN | 978-1-4799-0453-2 1089-778X |
Resumen | Protein structure prediction remains one of the
most important challenges in molecular biology. Contact maps
have been extensively used as a simplified representation of
protein structures. In this work, we propose a ... Protein structure prediction remains one of the most important challenges in molecular biology. Contact maps have been extensively used as a simplified representation of protein structures. In this work, we propose a multi-objective evolutionary approach for contact map prediction. The proposed method bases the prediction on a set of physico-chemical prop erties and structural features of the amino acids, as well as evolutionary information in the form of an amino acid position specific scoring matrix (PSSM). The proposed technique produces a set of decision rules that identify contacts between amino acids. Results obtained by our approach are presented and confirm the validity of our proposal. |
Agencias financiadoras | Junta de Andalucía Ministerio de Educación y Ciencia (MEC). España |
Identificador del proyecto | P07-TIC-02611
TIN2011-28956-C02-01 |
Cita | Márquez Chamorro, A.E., Divina, F., Bacardit, J. y Aguilar Ruiz, J.S. (2013). An efficient decision rule-based system for the protein residue-residue contact prediction. En CEC 2013: IEEE Congress on Evolutionary Computation (592-597), Cancún, México: IEEE Computer Society. |
Ficheros | Tamaño | Formato | Ver | Descripción |
---|---|---|---|---|
An efficient decision rule-based ... | 769.9Kb | [PDF] | Ver/ | |