dc.creator | Santiesteban Toca, Cosme E. | es |
dc.creator | Márquez Chamorro, Alfonso Eduardo | es |
dc.creator | Asencio Cortés, Gualberto | es |
dc.creator | Aguilar Ruiz, Jesús Salvador | es |
dc.date.accessioned | 2022-05-19T07:50:11Z | |
dc.date.available | 2022-05-19T07:50:11Z | |
dc.date.issued | 2011 | |
dc.identifier.citation | Santiesteban Toca, C.E., Márquez Chamorro, A.E., Asencio Cortés, G. y Aguilar Ruiz, J.S. (2011). A decision tree-based method for protein contact map prediction. En EvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (153-158), Torino, Italy: Springer. | |
dc.identifier.isbn | 978-3-642-20388-6 | es |
dc.identifier.issn | 0302-9743 | es |
dc.identifier.uri | https://hdl.handle.net/11441/133463 | |
dc.description.abstract | In this paper, we focus on protein contact map prediction.
We describe a method where contact maps are predicted using decision
tree-based model. The algorithm includes the subsequence information
between the couple of analyzed amino acids. In order to evaluate the
method generalization capabilities, we carry out an experiment using
173 non-homologous proteins of known structures. Our results indicate
that the method can assign protein contacts with an average accuracy of
0.34, superior to the 0.25 obtained by the FNETCSS method. This shows
that our algorithm improves the accuracy with respect to the methods
compared, especially with the increase of protein length | es |
dc.format | application/pdf | es |
dc.format.extent | 6 | es |
dc.language.iso | eng | es |
dc.publisher | Springer | es |
dc.relation.ispartof | EvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (2011), pp. 153-158. | |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Protein structure prediction | es |
dc.subject | Protein contact map prediction | es |
dc.subject | Decision trees | es |
dc.title | A decision tree-based method for protein contact map prediction | es |
dc.type | info:eu-repo/semantics/conferenceObject | es |
dcterms.identifier | https://ror.org/03yxnpp24 | |
dc.type.version | info:eu-repo/semantics/submittedVersion | es |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es |
dc.contributor.affiliation | Universidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticos | es |
dc.relation.publisherversion | https://link.springer.com/chapter/10.1007/978-3-642-20389-3_16 | es |
dc.identifier.doi | 10.1007/978-3-642-20389-3_16 | es |
dc.publication.initialPage | 153 | es |
dc.publication.endPage | 158 | es |
dc.eventtitle | EvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics | es |
dc.eventinstitution | Torino, Italy | es |
dc.relation.publicationplace | Berlin, Germany | es |
dc.identifier.sisius | 20131969 | es |