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dc.creatorSantiesteban Toca, Cosme E.es
dc.creatorMárquez Chamorro, Alfonso Eduardoes
dc.creatorAsencio Cortés, Gualbertoes
dc.creatorAguilar Ruiz, Jesús Salvadores
dc.date.accessioned2022-05-19T07:50:11Z
dc.date.available2022-05-19T07:50:11Z
dc.date.issued2011
dc.identifier.citationSantiesteban Toca, C.E., Márquez Chamorro, A.E., Asencio Cortés, G. y Aguilar Ruiz, J.S. (2011). A decision tree-based method for protein contact map prediction. En EvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (153-158), Torino, Italy: Springer.
dc.identifier.isbn978-3-642-20388-6es
dc.identifier.issn0302-9743es
dc.identifier.urihttps://hdl.handle.net/11441/133463
dc.description.abstractIn this paper, we focus on protein contact map prediction. We describe a method where contact maps are predicted using decision tree-based model. The algorithm includes the subsequence information between the couple of analyzed amino acids. In order to evaluate the method generalization capabilities, we carry out an experiment using 173 non-homologous proteins of known structures. Our results indicate that the method can assign protein contacts with an average accuracy of 0.34, superior to the 0.25 obtained by the FNETCSS method. This shows that our algorithm improves the accuracy with respect to the methods compared, especially with the increase of protein lengthes
dc.formatapplication/pdfes
dc.format.extent6es
dc.language.isoenges
dc.publisherSpringeres
dc.relation.ispartofEvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (2011), pp. 153-158.
dc.rightsAttribution-NonCommercial-NoDerivatives 4.0 Internacional*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/*
dc.subjectProtein structure predictiones
dc.subjectProtein contact map predictiones
dc.subjectDecision treeses
dc.titleA decision tree-based method for protein contact map predictiones
dc.typeinfo:eu-repo/semantics/conferenceObjectes
dcterms.identifierhttps://ror.org/03yxnpp24
dc.type.versioninfo:eu-repo/semantics/submittedVersiones
dc.rights.accessRightsinfo:eu-repo/semantics/openAccesses
dc.contributor.affiliationUniversidad de Sevilla. Departamento de Lenguajes y Sistemas Informáticoses
dc.relation.publisherversionhttps://link.springer.com/chapter/10.1007/978-3-642-20389-3_16es
dc.identifier.doi10.1007/978-3-642-20389-3_16es
dc.publication.initialPage153es
dc.publication.endPage158es
dc.eventtitleEvoBIO 2011: 9th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformaticses
dc.eventinstitutionTorino, Italyes
dc.relation.publicationplaceBerlin, Germanyes
dc.identifier.sisius20131969es

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