NameRuiz de la Haba, Rafael
DepartmentMicrobiología y Parasitología
Knowledge areaMicrobiología
Professional categoryProfesor Titular de Universidad
E-mailRequest
           
  • No. publications

    36

  • No. visits

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A long-awaited taxogenomic investigation of the family Halomonadaceae

Ruiz de la Haba, Rafael; Arahal, David R.; Sánchez-Porro Álvarez, Cristina; Chuvochina, Maria; Wittouck, Stijn; Hugenholtz, Philip; Ventosa Ucero, Antonio (Frontiers Media SA, 2023)
The family Halomonadaceae is the largest family composed of halophilic bacteria, with more than 160 species with validly ...
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Biosynthetic gene profiling and genomic potential of the novel photosynthetic marine bacterium Roseibaca domitiana

Gattoni, Giuliano; Di Costanzo, Fabiana; Ruiz de la Haba, Rafael; Fernández, Ana B.; Guerrero Flores, Shaday; Selem Mojica, Nelly; Ventosa Ucero, Antonio; Corral, Paulina (Frontiers Media SA, 2023)
Shifting the bioprospecting targets toward underexplored bacterial groups combined with genome mining studies contributes ...
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Natrinema salsiterrestre sp. nov., an extremely halophilic archaeon isolated from a hypersaline soil

Strakova, Dasa; Sánchez-Porro Álvarez, Cristina; Ruiz de la Haba, Rafael; Ventosa Ucero, Antonio (Microbiology Society, 2023)
An extremely halophilic archaeal strain, designated S1CR25-10T, was isolated from hypersaline soil sampled in the Odiel ...
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A step into the rare biosphere: genomic features of the new genus Terrihalobacillus and the new species Aquibacillus salsiterrae from hypersaline soils

Galisteo Gómez, Cristina; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (Frontiers Media S.A., 2023)
Hypersaline soils are a source of prokaryotic diversity that has been overlooked until very recently. The phylum Bacillota, ...
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Biotin pathway in novel Fodinibius salsisoli sp. nov., isolated from hypersaline soils and reclassification of the genus Aliifodinibius as Fodinibius

Galisteo Gómez, Cristina; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (Frontiers Media, 2023)
Hypersaline soils are extreme environments that have received little attention until the last few years. Their halophilic ...
Chapter of Book
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Detección de microorganismos en restos arqueológicos: técnicas dependientes e independientes de cultivo

Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio; Ruiz de la Haba, Rafael (Consejería de Turismo, Cultura y Deporte. Junta de Andalucía, 2023)
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Characterization of Haloarcula terrestris sp. nov. and reclassification of a Haloarcula species based on a taxogenomic approach

Strakova, Dasa; Galisteo Gómez, Cristina; Ruiz de la Haba, Rafael; Ventosa Ucero, Antonio (Microbiology Society, 2023)
An extremely halophilic archaeon, strain S1AR25-5AT, was isolated from a hypersaline soil sampled in Odiel Saltmarshes ...
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Metagenomes of a Crystallizer Pond from Isla Cristina Saltern in Spain

García Roldán, Alicia; Ruiz de la Haba, Rafael; Vera Gargallo, Blanca; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (American Society for Microbiology, 2023)
The metagenomic sequences of the prokaryotic microbiota from the brine of a crystallizer pond with 42% (wt/vol) salinity ...
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Genomic study and lipidomic bioassay of Leeuwenhoekiella parthenopeia: A novel rare biosphere marine bacterium that inhibits tumor cell viability

Gattoni, Giuliano; Ruiz de la Haba, Rafael; Martín, Jesús; Reyes, Fernando; Sánchez-Porro Álvarez, Cristina; Feola, Antonia; Zuchegna, Candida; Guerrero-Flores, Shaday; Varcamonti, Mario; Ricca, Ezio; Selem-Mojica, Nelly; Ventosa Ucero, Antonio; Corral, Paulina (Frontiers Media SA, 2023)
The fraction of low-abundance microbiota in the marine environment is a promising target for discovering new bioactive ...
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Helicobacter ibis sp. nov., isolated from faecal droppings of black-faced ibis (Theristicus melanopis)

López Cantillo, Mónica; Vidal Veuthey, Boris; Mella, Armin; Ruiz de la Haba, Rafael; Collado, Luis (Microbiology Society, 2023)
As part of a larger study on Epsilonproteobacteria carried by wild birds in the city of Valdivia (southern Chile), two ...
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Genomic-based phylogenetic and metabolic analyses of the genus Natronomonas, and description of Natronomonas aquatica sp. nov.

García Roldán, Alicia; Durán Viseras, Ana; Ruiz de la Haba, Rafael; Corral, Paulina; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (Frotiers Media SA, 2023)
The genus Natronomonas is classified on the family Haloarculaceae, within the class Halobacteria and currently includes ...
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Editorial: Extremophiles: Microbial genomics and taxogenomics

Ruiz de la Haba, Rafael; Antunes, André; Hedlund, Brian P. (Frontiers Media S.A., 2022)
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Taxogenomic and Comparative Genomic Analysis of the Genus Saccharomonospora Focused on the Identification of Biosynthetic Clusters PKS and NRPS

Ramírez Durán, Ninfa; Ruiz de la Haba, Rafael; Vera Gargallo, Blanca; Sánchez-Porro Álvarez, Cristina; Alonso Carmona, Scarlett; Sandoval Trujillo, Horacio; Ventosa Ucero, Antonio (Frontiers Media, 2021)
Actinobacteria are prokaryotes with a large biotechnological interest due to their ability to produce secondary metabolites, ...
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Phylogenomics of Haloarchaea: The Controversy of the Genera Natrinema-Haloterrigena

Ruiz de la Haba, Rafael; Minegishi, Hiroaki; Kamekura, Masahiro; Shimane, Yasuhiro; Ventosa Ucero, Antonio (Frontiers Media, 2021)
The haloarchaeal genera Natrinema and Haloterrigena were described almost simultaneously by two different research groups ...
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Draft Genome Sequence of Saccharomonospora piscinae KCTC 19743T, an Actinobacterium Containing Secondary Metabolite Biosynthetic Gene Clusters

Ramírez Durán, Ninfa; Ruiz de la Haba, Rafael; Vera Gargallo, Blanca; Sánchez-Porro Álvarez, Cristina; Alonso Carmona, Scarlett; Sandoval Trujillo, Horacio; Ventosa Ucero, Antonio (American Society for Microbioloby, 2020)
The draft genome sequence of Saccharomonospora piscinae KCTC 19743T, with a size of 4,897,614 bp, was assembled into 11 ...
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Genome-based analyses reveal a synonymy among Halorubrum distributum Zvyagintseva and Tarasov 1989; Oren and Ventosa 1996, Halorubrum terrestre Ventosa et al. 2004, Halorubrum arcis Xu et al. 2007 and Halorubrum litoreum Cui et al. 2007. Emended description of Halorubrum distributum Zvyagintseva and Tarasov 1989; Oren and Ventosa 1996

Infante Domínguez, María del Carmen; Ruiz de la Haba, Rafael; Corral, Paulina; Sánchez-Porro Álvarez, Cristina; Arahal, David R.; Ventosa Ucero, Antonio (Microbiology Society, 2020)
A comparative taxonomic study of Halorubrum distributum , Halorubrum terrestre , Halorubrum arcis and Halorubrum litoreum ...
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Optimized Preparation of Levofloxacin Loaded Polymeric Nanoparticles

Fernández Delgado, Ángela; López López, Manuel; Blanco Arévalo, Daniel; Moyá Morán, María Luisa; Ventosa Ucero, Antonio; Carrera Sánchez, Cecilio; Ruiz de la Haba, Rafael; Bernal Pérez, Eva; López-Cornejo, María del Pilar (MDPI, 2019)
In this work, poly(lactic-co-glycolic acid) (PLGA) and chitosan (CS) nanoparticles were synthesized with the purpose of ...
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Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina

Galisteo Gómez, Cristina; Sánchez-Porro Álvarez, Cristina; Ruiz de la Haba, Rafael; López Hermoso, Clara; Fernández González, Ana Beatriz; Farias, María Eugenia; Ventosa Ucero, Antonio (MDPI, 2019)
The genus Salinivibrio belongs to the family Vibrionaceae and includes Gram-stain-negative, motile by a polar flagellum, ...
Presentation
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El uso de una escape room como recurso docente en la Facultad de Farmacia

Gutiérrez-Praena, Daniel; Ríos-Reina, Rocío; Ruiz Laza, Rocío; Talero Barrientos, Elena Mª; Callejón Fernández, Rocío; Callejón Fernández, Raquel María; Casas Delgado, Marta; Ruiz de la Haba, Rafael; García Miranda, Pablo; Carrascal Moreno, María Livia; Guzmán Guillén, Remedios; Sánchez Hidalgo, Marina (Editorial Universitat Politècnica de València, 2019)
Las Escape Rooms son un tipo de recurso que está siendo utilizado por muchos educadores, propiciando elementos de colaboración ...
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Comparative Genomics and Phylogenomic Analysis of the Genus Salinivibrio

Ruiz de la Haba, Rafael; López Hermoso, Clara; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio; Konstantinidis, Konstantinos T. (Frontiers Media, 2019)
In the genomic era phylogenetic relationship among prokaryotes can be inferred from the core orthologous genes (OGs) or ...
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Halorubrum chaoviator mancinelli et al. 2009 is a later, heterotypic synonym of halorubrum ezzemoulense kharroub et al. 2006. emended description of halorubrum ezzemoulense kharroub et al. 2006

Corral, Paulina; Ruiz de la Haba, Rafael; Infante-Domínguez, Carmen; Sánchez-Porro Álvarez, Cristina; Amoozegar, Mohammad Ali; Papke, R. Thane; Ventosa Ucero, Antonio (Microbiology Society, 2018)
A polyphasic comparative taxonomic study of Halorubrum ezzemoulense Kharroub et al. 2006, Halorubrum chaoviator Mancinelli ...
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Emended description of Salinivibrio proteolyticus, including salinivibrio costicola subsp. Vallismortis and five new isolates

López Hermoso, Clara; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (Microbiology Society, 2018)
We carried out a comparative taxonomic study of Salinivibrio proteolyticus and Salinivibrio costicola subsp. vallismortis, ...
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Salinivibrio kushneri sp. nov., a moderately halophilic bacterium isolated from salterns

López Hermoso, Clara; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio (Elsevier, 2018)
Ten Gram-strain-negative, facultatively anaerobic, moderately halophilic bacterial strains, designated AL184T, IB560, ...
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Genotypic and Lipid Analyses of Strains From the Archaeal Genus Halorubrum Reveal Insights Into Their Taxonomy, Divergence, and Population Structure

Ruiz de la Haba, Rafael; Corral Villa, Paulina; Sánchez-Porro Álvarez, Cristina; Infante Domínguez, María del Carmen; Ventosa Ucero, Antonio (Frontiers Media, 2018)
To gain a better understanding of how divergence occurs, and how taxonomy can benefit from studying natural populations, ...
PhD Thesis
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Análisis filogenético y genómico del género salinivibrio

López Hermoso, Clara; Ventosa Ucero, Antonio; Sánchez-Porro Álvarez, Cristina; Ruiz de la Haba, Rafael (2017)
The genus Salinivibrio constitutes a separate phylogenetic lineage within the Gammaproteobacteria according to 16S rRNA ...
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Draft Genome Sequences of Salinivibrio proteolyticus, Salinivibrio sharmensis, Salinivibrio siamensis, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. vallismortis, and 29 New Isolates Belonging to the Genus Salinivibrio

López Hermoso, Clara; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Bayliss, Sion C.; Ventosa Ucero, Antonio (American Society for Microbiology, 2017)
The draft genome sequences of 5 type strains of species of the halophilic genus Salinivibrio and 29 new isolates from ...
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Draft Genome Sequence of Saccharomonospora sp. Strain LRS4.154, a Moderately Halophilic Actinobacterium with the Biotechnologically Relevant Polyketide Synthase and Nonribosomal Peptide Synthetase Systems

Alonso Carmona, Scarlett; Vera Gargallo, Blanca; Ruiz de la Haba, Rafael; Ventosa Ucero, Antonio; Sandoval Trujillo, Horacio; Ramírez Durán, Ninfa (American Society for Microbiology, 2017)
The draft genome sequence of Saccharomonospora sp. strain LRS4.154, a moderately halophilic actinobacterium, has been ...
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Assessment of MultiLocus Sequence Analysis As a Valuable Tool for the Classification of the Genus Salinivibrio

López Hermoso, Clara; Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; Thane Papke, R.; Ventosa Ucero, Antonio (Frontiers Media, 2017)
The genus Salinivibrio includes obligatory halophilic bacteria and is commonly isolated from hypersaline habitats and ...
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Rings reconcile genotypic and phenotypic evolution within the proteobacteria

Lake, James A.; Larsen, Joseph; Sarna, Brooke; Ruiz de la Haba, Rafael; Pu, Yiyi; Koo, Hyun-min; Zhao, Jun; Sinsheimer, Janet S. (Oxford University Press, 2015)
Although prokaryotes are usually classified using molecular phylogenies instead of phenotypes after the advent of gene ...
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Horizontal gene transfer, dispersal and haloarchaeal speciation

Sánchez-Porro Álvarez, Cristina; Thane Papke, R.; Corral, Paulina; Ram Mohan, Nikhil; Ruiz de la Haba, Rafael; Makkay, Andrea M.; Ventosa Ucero, Antonio (2015)
The Halobacteria are a well-studied archaeal class and numerous investigations are showing how their diversity is distributed ...
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Larsania salina gen. nov., sp. nov., a new member of the family Halomonadaceae based on multilocus secuence analysis

León León, María José; Sánchez-Porro Álvarez, Cristina; Ruiz de la Haba, Rafael; Llamas, I.; Ventosa Ucero, Antonio (2014)
Two Gram-staining-negative, moderately halophilic bacteria, strains M1-18T and L1-16, were isolated from a saltern located ...
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Draft Genome Sequence of the Moderately Halophilic Bacterium Pseudoalteromonas ruthenica Strain CP76

Ruiz de la Haba, Rafael; Sánchez-Porro Álvarez, Cristina; León León, María José; Papke, R. Thane; Ventosa Ucero, Antonio (2013)
Pseudoalteromonas ruthenica strain CP76, isolated from a saltern in Spain, is a moderately halophilic bacterium belonging ...
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Draft Genome of the Marine Gammaproteobacterium Halomonas titanicae

Sánchez-Porro Álvarez, Cristina; Ruiz de la Haba, Rafael; Cruz Hernández, Norge; González Aranda, Juan Miguel; Reyes Guirao, Cristina; Navarro Sampedro, Laura; Carballo Álvarez, Modesto José; Ventosa Ucero, Antonio (2013)
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Draft Genome Sequence of the Moderately Halophilic Bacterium Marinobacter lipolyticus Strain SM19

Papke, R. Thane; Ruiz de la Haba, Rafael; Infante Domínguez, María del Carmen; Pérez Gómez, Dolores; Sánchez-Porro Álvarez, Cristina; Lapierre, Pascal; Ventosa Ucero, Antonio (2013)
Marinobacter lipolyticus strain SM19, isolated from saline soil in Spain, is a moderately halophilic bacterium belonging ...
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Bacilus locisalis sp. nov. , a new haloalkaliphilic species from hypersaline and alkaline lakes of China, Kenya and Tanzania

Márquez Marcos, María del Carmen; Carrasco, I.J.; Ruiz de la Haba, Rafael; Jones, Brian E.; Grant, William D.; Ventosa Ucero, Antonio (2011)
A polyphasic taxonomic study was performed on seven Bacillus-like bacteria isolated from three hypersaline and alkaline ...
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Salimicrobium salexigens sp. nov., a moderately halophilic bacterium from salted hides

Ruiz de la Haba, Rafael; Yilmaz, P.; Sánchez-Porro Álvarez, Cristina; Birbir, M.; Ventosa Ucero, Antonio (2011)
Two Gram-positive, moderately halophilic bacteria, designated strains 29CMIT and 53CMI, were isolated from salted hides. ...