Browsing by Author "Divina, Federico"
Now showing items 1-18 of 18
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Presentation
A Multi-objective Genetic Algorithm for the Protein Structure Prediction
(IEEE Computer Society, 2011)The Protein Structure Prediction (PSP) problem consists of predicting the structure of a protein from its amino acids ...
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Presentation
A novel approach for avoiding overlapping among biclusters in expression data
(IEEE Computer Society, 2008)Biclustering is a technique used in analysis of microarray data. It aims at discovering subsets of genes that presents ...
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Presentation
A NSGA-II Algorithm for the Residue-Residue Contact Prediction
(Springer, 2012)We present a multi-objective evolutionary approach to predict protein contact maps. The algorithm provides a set of ...
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Presentation
Alpha Helix Prediction Based on Evolutionary Computation
(Springer, 2010)Multiple approaches have been developed in order to predict the protein secondary structure. In this paper, we propose ...
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Article
An effective measure for assessing the quality of biclusters
(Elsevier, 2012)Biclustering is becoming a popular technique for the study of gene expression data. This is mainly due to the capability ...
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Presentation
An efficient decision rule-based system for the protein residue-residue contact prediction
(IEEE Computer Society, 2013)Protein structure prediction remains one of the most important challenges in molecular biology. Contact maps have been ...
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Presentation
An Evolutionary Approach for Protein Contact Map Prediction
(Springer, 2011)In this study, we present a residue-residue contact prediction approach based on evolutionary computation. Some amino acid ...
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Article
Contact map prediction using a large-scale ensemble of rule sets and the fusion of multiple predicted structural features
(Oxford University Press, 2012)Motivation: The prediction of a protein’s contact map has become in recent years, a crucial stepping stone for the ...
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Presentation
Evaluación de biclusters en un entorno evolutivo
(Thomson, 2007)La mayoría de las heurísticas utilizadas para la búsqueda de biclusters en microarrays hacen uso del residuo cuadrático ...
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Presentation
Evaluación de biclusters mediante intra-fluctuaciones mínimas: un enfoque multi-objetivo
(2007)Las técnicas de biclustering aplicadas a datos de expresión génica persiguen la extracción de subconjuntos de genes ...
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Article
Evolutionary decision rules for predicting protein contact maps
(Springer, 2012)Protein structure prediction is currently one of the main open challenges in Bioinformatics. The protein contact map is ...
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Presentation
Evolutionary Protein Contact Maps Prediction Based on Amino Acid Properties
(Springer, 2011)Protein structure prediction is one of the main challenges in Bioinformatics. An useful representation for protein 3D ...
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Presentation
Evolutionary Search of Biclusters by Minimal Intrafluctuation
(IEEE Computer Society, 2007)Biclustering techniques aim at extracting significant subsets of genes and conditions from microarray gene expression ...
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Article
Improved biclustering on expression data through overlapping control
(Emerald, 2009)Purpose – The purpose of this paper is to present a novel control mechanism for avoiding overlapping among biclusters in ...
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Presentation
Improving the Efficiency of MECoMaP: A Protein Residue-Residue Contact Predictor
(Springer, 2013)This work proposes an improvement of the multi-objective evolutionary method for the protein residue-residue contact ...
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Article
Protein Secondary Structures Prediction based on Evolutionary Computation
(Association for Computing Machinery (ACM), 2011)In this paper we propose an approach based on evolutionary computation for the prediction of secondary protein structure ...
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Presentation
Residue-residue Contact Prediction based on Evolutionary Computation
(Springer, 2011)In this study, a novel residue-residue contacts prediction approach based on evolutionary computation is presented. The ...
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Presentation
Virtual Error: A New Measure for Evolutionary Biclustering
(Springer, 2007)Many heuristics used for finding biclusters in microarray data use the mean squared residue as a way of evaluating the ...